Thanks guys, well I have good news!
After I let everything cool down over night I re-checked the cabling and the charge pipe sensor was not fully clicked in. I checked it so many times yesterday before driving so I'm going to keep an eye on things and make sure it stays clicked in. It is entirely possible when I was trying to secure the cables I loosened it and while moving cables and didn't get it fully secured the last time.
I did a few drives with the bypass adapter and once all codes were cleared I connected the module again and did a few more drives this morning. So far so good, no errors, power does seem a little better than stock and shifts are much smoother than with the JB+, though less of a boosted feel and I'm not hearing the diverter valve at all.
I'm going to chock this up to user error at this point, sorry for the raised concern. We'll see what other thoughts I have after some more driving. I'll still keep an eye to make sure things stay secured.
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